Index A | C | D | F | G | I | M | N | R | S | T | V A add_iedge_row() (giglib.Tables method) add_row() (giglib.tables.IEdgeTable method) (giglib.tables.NodeTable method) append() (giglib.tables.IEdgeTable method) C change_times() (giglib.Tables method) chromosomes_as_child() (giglib.tables.IEdgeTable method) clear() (giglib.Tables method) (giglib.tables.IEdgeTable method) copy() (giglib.Tables method) (giglib.tables.IEdgeTable method) D decapitate() (giglib.Graph method) (giglib.Tables method) F find_mrca_regions() (giglib.Graph method) (giglib.Tables method) freeze() (giglib.Tables method) from_tree_sequence() (giglib.Graph class method) (giglib.Tables class method) G Graph (class in giglib) graph() (giglib.Tables method) I ids_for_child() (giglib.tables.IEdgeTable method) iedges (giglib.Graph property) IEDGES_CHILD_INTERVAL_POSITIVE (giglib.ValidFlags attribute) IEDGES_COMBO_STANDALONE (giglib.ValidFlags attribute) iedges_for_child() (giglib.Graph method) IEDGES_FOR_CHILD_ADJACENT (giglib.ValidFlags attribute) IEDGES_FOR_CHILD_NONOVERLAPPING (giglib.ValidFlags attribute) IEDGES_FOR_CHILD_PRIMARY_ORDER_CHR_ASC (giglib.ValidFlags attribute) IEDGES_FOR_CHILD_SECONDARY_ORDER_LEFT_ASC (giglib.ValidFlags attribute) iedges_for_parent() (giglib.Graph method) IEDGES_INTEGERS (giglib.ValidFlags attribute) IEDGES_INTERVALS (giglib.ValidFlags attribute) IEDGES_PARENT_OLDER_THAN_CHILD (giglib.ValidFlags attribute) IEDGES_PRIMARY_ORDER_CHILD_TIME_DESC (giglib.ValidFlags attribute) IEDGES_SAME_PARENT_CHILD_FOR_EDGE (giglib.ValidFlags attribute) IEDGES_SECONDARY_ORDER_CHILD_ID_ASC (giglib.ValidFlags attribute) IEDGES_SORTED (giglib.ValidFlags attribute) IEDGES_WITHIN_CHILD_SORTED (giglib.ValidFlags attribute) IEdgeTable (class in giglib.tables) individuals (giglib.Graph property) IndividualTable (class in giglib.tables) M max_pos() (giglib.Graph method) max_pos_as_child() (giglib.tables.IEdgeTable method) min_pos_as_child() (giglib.tables.IEdgeTable method) N nodes (giglib.Graph property) NodeTable (class in giglib.tables) R remove_non_ancestral_nodes() (giglib.Tables method) S sample_ids (giglib.Tables property) sample_resolve() (giglib.Graph method) (giglib.Tables method) samples() (giglib.Graph method) sequence_length() (giglib.Graph method) sort() (giglib.Tables method) T Tables (class in giglib) to_tree_sequence() (giglib.Graph method) total_sequence_length() (giglib.Graph method) transform_interval() (giglib.tables.IEdgeTable method) V ValidFlags (class in giglib)